TEENA: an integrated web server for Transposable Element ENrichment Analysis

Step1: Choose species and assembly

Step2: Upload genomic interval file

Demo BED file for download: GATA3_hg38.bed
Maximum file size for uploads is: 20Mb
More description about BED format can be found here. Only the first 3 columns are used for analysis.

Step3: Parameter settings

Use mid-point for overlapping (otherwise use whole region)
Yes No

Exclude genomic gaps (i.e. the Ns in the reference genome)
Yes No

Exclude promoter regions (defined as +/- 500 bp from TSSs)
Yes No

Step4: Job submission

It usually takes 2-3 minutes to finish. Please don't close this page. The results will appear below soon.

We're working again to increase TEENA server capabilities to allow for more jobs.Submitting assignments too frequently may trigger our firewall to block your IP due to potential DOS attacks. During firewall upgrades, external network access may be unavailable.